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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.055340.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
GRAS |
Protein Properties |
Length: 472aa MW: 53151 Da PI: 6.2451 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.055340.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 466.1 | 2e-142 | 46 | 468 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l++lLl+cA++v+ g+l a+ +L ++s+laspdgd+mqR+aayf+eALa r+++++++lyka+++++ + +see+ + klf++++P+lk+++
Cucsa.055340.1 46 LIHLLLTCANHVAVGSLDSANLALDQISHLASPDGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKIP--MVSEEILVKKLFFDMFPFLKVAF 138
689*************************************************************999998..69********************* PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+++NqaI+ea+ege+++HiiD+++++ +QW+aLlq L+ Rpegpp+lRiTgv++ ++e l ++++rL++ Ae+l++pf+fn v++rledl+
Cucsa.055340.1 139 VLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQILSVRPEGPPHLRITGVHP----RQEILDQMARRLTNEAEKLDIPFQFNS-VVSRLEDLD 228
******************************************************....99*************************.7******** PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrll........................................................desvsleserdevLk 229
+e+Lrvk+gEala+n+vlqlh++l + s++ + ++d++L+
Cucsa.055340.1 229 MEKLRVKTGEALAINSVLQLHNFLgydnealqkpspsaaknvngvqysryphlnqttlrelldkdmvngcspspdsvsssALSQANATKIDSFLN 323
****************************************************************************997744444444789**** PP
GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324
++sl Pkv+vv+eq+++hn+++ +er+leal++y+a+fd+le++++r+s er k+E++l+g+ei+n++acegaer+erhe+ e+W++r++ aGF
Cucsa.055340.1 324 GLWSLTPKVMVVTEQDSNHNGTTVMERLLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKHETWNQRFDVAGF 418
*********************************************************************************************** PP
GRAS 325 kpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
++v+ls++ + qa++ll+ ++ gyr++ee+g+++++W+drpL+svSaWr
Cucsa.055340.1 419 RQVSLSYYGMLQARSLLQGYGCGGYRMKEENGCVMICWQDRPLFSVSAWR 468
*************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MFQDEGTSSI TSSPLQFFTM MSLSPKLGSP YPWLRELKSE ERGLYLIHLL LTCANHVAVG 60 SLDSANLALD QISHLASPDG DTMQRIAAYF AEALADRILK TWPGLYKAFN STKIPMVSEE 120 ILVKKLFFDM FPFLKVAFVL TNQAIVEAME GEKMIHIIDL NANETAQWLA LLQILSVRPE 180 GPPHLRITGV HPRQEILDQM ARRLTNEAEK LDIPFQFNSV VSRLEDLDME KLRVKTGEAL 240 AINSVLQLHN FLGYDNEALQ KPSPSAAKNV NGVQYSRYPH LNQTTLRELL DKDMVNGCSP 300 SPDSVSSSAL SQANATKIDS FLNGLWSLTP KVMVVTEQDS NHNGTTVMER LLEALHTYAA 360 IFDCLESNMS RTSLERLKLE KMLFGEEIKN IIACEGAERK ERHEKHETWN QRFDVAGFRQ 420 VSLSYYGMLQ ARSLLQGYGC GGYRMKEENG CVMICWQDRP LFSVSAWRCC K*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |