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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa20g026430.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
B3 |
Protein Properties |
Length: 290aa MW: 33338.4 Da PI: 8.5979 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa20g026430.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 51.9 | 1.4e-16 | 18 | 109 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
ffk+l + d +++ + +p +f++++++ + s ++l+ ++g sW++++ +++ + ++ +kGW +F ++n+L +++f++F+++g+++f v
Csa20g026430.1 18 FFKILRRGDLSSEIMRGIPLNFIKSISE-EDLSANIVLKVSWGSSWTIRI--SRNLCFyFMEKKGWDQFLSDNDLGDNEFLTFTHKGHRCF--SV 107
8999999999999999*******99954.46899****************..999999555669*********************999998..55 PP
EE CS
B3 95 kv 96
+
Csa20g026430.1 108 DI 109
55 PP
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2 | B3 | 40.1 | 6.6e-13 | 205 | 285 | 15 | 99 |
-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 15 rlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
l +pk f + h+ k e+++ ++ d e+ sW+v +++ +++++ + +GW + +k+ gL gD+++F+l++ +e+vv+v r+
Csa20g026430.1 205 FLGIPKMFEQLHMPK--ETTMFKIHDpERETSWDVMYKFINNKQSR-FCAGWIRLAKDLGLTIGDVCTFTLVK--PTEMVVTVTRR 285
467999997666533..5569999996777*********6666664.456********************976..77789999887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MMNRVFGEMI DDAEKPGFFK ILRRGDLSSE IMRGIPLNFI KSISEEDLSA NIVLKVSWGS 60 SWTIRISRNL CFYFMEKKGW DQFLSDNDLG DNEFLTFTHK GHRCFSVDIY QIDGMELLRP 120 RKSAPTVASS SGLNKTEQRE NMFEHSSSES SYLGLKTAES TGRRQTEKSK KKKKMKVESI 180 SDGSEDDTLI VPEFTITIKK SYLIFLGIPK MFEQLHMPKE TTMFKIHDPE RETSWDVMYK 240 FINNKQSRFC AGWIRLAKDL GLTIGDVCTF TLVKPTEMVV TVTRREINL*
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