 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa20097s010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
GRAS |
| Protein Properties |
Length: 87aa MW: 9655.16 Da PI: 6.8256 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa20097s010.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 49.5 | 8e-16 | 2 | 85 | 189 | 276 |
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklp 276
l+++++r+ +gE ++V ++ +++r l s ++++++ ++++sPkvvv+v++e ++ +s+sF ++f++ale+y+++++sl+a +p
Csa20097s010.1 2 LSFKAIRFVEGERTIVLISPAIFRRL-------SGISDFVNNLRRVSPKVVVFVDSEgwTEIaGSGSFRREFVSALEFYTMVLESLDAAAP 85
78899********************9.......33557*******************76677899*********************99877 PP
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK118497 | 3e-89 | AK118497.1 Arabidopsis thaliana At4g36710 mRNA for ap2 SCARECROW-like protein, complete cds, clone: RAFL19-73-D11. |
| GenBank | AK229637 | 3e-89 | AK229637.1 Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL19-66-B20. |
| GenBank | AL161589 | 3e-89 | AL161589.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85. |
| GenBank | BT011807 | 3e-89 | BT011807.1 Arabidopsis thaliana At4g36710 mRNA sequence. |
| GenBank | CP002687 | 3e-89 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
| GenBank | Z99708 | 3e-89 | Z99708.1 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2. |
