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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa18g038830.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
ERF |
| Protein Properties |
Length: 376aa MW: 41964.4 Da PI: 9.6979 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa18g038830.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.7 | 3.4e-19 | 202 | 251 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr++ +g+WvAeIr p++ r+r +lg+f tae+Aa a+++a+ k++g
Csa18g038830.1 202 LYRGVRQRQ-WGKWVAEIRLPKN---RTRLWLGTFETAEQAALAYDQAAHKIRG 251
59****999.**********965...5************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MAIALNMNGY IDEFTKALEP FMKVSSSSSS SSTSSSNPKT LTPNFIPTTT NNNQVLPVSN 60
QPGPIGLNQL TPTQILQIQT ELHLRHNHQS RRRSALNMNG YIDEFTKALE PFMKVSSSSS 120
TSSSNPKTLT PNFITDNNQV LPVSNQPGPI GLNQLTPSQI LQIQTELHLR HNHQSRRRSG 180
HLLTAKPTPI KKTNVATKPV KLYRGVRQRQ WGKWVAEIRL PKNRTRLWLG TFETAEQAAL 240
AYDQAAHKIR GDNARLNFPN IALQGDYYKH TLSPSIKAKI ESICNSSDLL PLPQLKKQAK 300
TEDVFSGFHY TGTKPEKEPE FDDKFGSGFS GSSPESDITL LDFSSDCMKE DESFLTGLHK 360
YPSLEIDWDA LEKLF*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
