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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa18g036390.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
Dof |
Protein Properties |
Length: 432aa MW: 46420 Da PI: 8.9041 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa18g036390.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 123.3 | 8.3e-39 | 135 | 194 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++ +kcprC+st+tkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rknkk s
Csa18g036390.1 135 DHPQKCPRCESTHTKFCYYNNYSLAQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPS 194
6789*****************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 432 aa
Download sequence Send
to blast |
SNPEEKKGPL LASFLFTSQP PNSSLPSHLI SLLLLLPLSL SLYFVQRLLL KVSLSPKLNK 60 QTKHKMGLTS LQVCMDSDWL QEAESSGGSM LDSSTNSPSA ADILAACSTR PQASAVAVAA 120 AALMDGGRRL RPPHDHPQKC PRCESTHTKF CYYNNYSLAQ PRYFCKTCRR YWTKGGTLRN 180 IPVGGGCRKN KKPSSPNSSS STSSGKKPSN IVATNTTDLM ALAQTYQNSP LGFSHFGGMM 240 GSYSTPEHSN VGFLESKYGG LVPQSPRPID FLDSKFDLMG VNNDNLVMVD HGSNRDYHHH 300 HHHMGLHHGL GLNNNNGGFN GISPGSNGNG GGLMDISACQ RLMLSSYDHQ HYNHQEDHQR 360 VTTITDVKPN PKLLSLDWQQ DQCYSNGGGN GGVGKSDGGG YGGGGYINGL GSSWNGLMNG 420 YGSSTKTNSL V*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression (PubMed:19915089). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification (PubMed:19915089). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:19915089, ECO:0000269|PubMed:30626969}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK228992 | 0.0 | AK228992.1 Arabidopsis thaliana mRNA for Dof zinc finger protein - like, complete cds, clone: RAFL16-29-O12. |