 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa18g033410.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
AP2 |
| Protein Properties |
Length: 524aa MW: 57344.7 Da PI: 7.0437 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa18g033410.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 53 | 8.2e-17 | 158 | 207 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
Csa18g033410.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAVKFRG 207
78*******************......55***********************9997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 524 aa
Download sequence Send
to blast |
MLDLNLGLDS VTVKGVSLMN QMDESVTSNS SVVNAEASSS CIDGEDELCS TRTVKFQFEI 60
LKGGGGEEDD DDDDGYDDER SAVMMTKEFF PVPRDGINFM DSSAQSSRNT VDISFQRGNQ 120
GGDFIGIGSG GGGDAARVMQ PPSQPVKKSR RGPRSKSSQY RGVTFYRRTG RWESHIWDCG 180
KQVYLGGFDT AHAAARAYDR AAVKFRGLEA DINFVISDYE EDLKQMANLS KEEVVQVLRR 240
QSSGFSRNNS RYQGVALQKI GGWGAQMEQF HGNMGCDKAA MQWNGRQAAS LIEPHASRMI 300
PEAANVKLDL NLGISLSLGD GPKQKDRAQR LHLVPNSIVC GRNTKMENHM ATASCDTPFN 360
FLKRGSDHLS NRHSLPSAFF SPMMENHMAT ASCDTPFNFL KRGSDHLSNR HSLPSAFFSP 420
MERTLEKGPM LRSHQSFPAR TWQGHDQSSG GTAVAATAPP LFSNAASSGF SLSDTRPPSS 480
PATPHPSQPF FNLNQPGLYV VHPSDYTSQN HHHNLMNHSQ PPP*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT001916 | 0.0 | BT001916.1 Arabidopsis thaliana clone C105157 putative APETALA2 protein (At5g60120) mRNA, complete cds. |
