 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa18g020670.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
AP2 |
| Protein Properties |
Length: 377aa MW: 41664.6 Da PI: 9.6811 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa18g020670.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 64.8 | 1.8e-20 | 75 | 124 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g
Csa18g020670.1 75 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 124
7********.**********7.....337************************998 PP
|
| 2 | AP2 | 64.8 | 1.8e-20 | 229 | 278 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g
Csa18g020670.1 229 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 278
7********.**********7.....337************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MSAMVSALTQ VVSGRSQTEA ERAQSSSSSA GDKRGWLRID SSLPSSFAPV DSSLGPIEEF 60
TSKALPDEIG GKRRRYRGVR QRPWGKWAAE IRDPHKAARV WLGTFDTAEA AARAYDEAAL 120
RFRGSKAKLN FPEDVRLLLP PPPPPPPPPL PLPADTVANK EEEDLMNYWS YSNLLQSSGQ 180
RSFYGHGQED SSNILEHSPM KQPLPPSSSR QKEFTSKALP DEIGGKRRRY RGVRQRPWGK 240
WAAEIRDPHK AARVWLGTFD TAEAAARAYD EAALRFRGSK AKLNFPEDVR LLLPPPPPPP 300
PPPLPLPADT VANKEEEDLM NYWSYSNLLQ SSGQRSFYGH GQEDSSNILE HSPMKQPLPP 360
SSSRQSSSDF SGPSST*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
