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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa17g095120.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
M-type_MADS |
Protein Properties |
Length: 338aa MW: 38323.2 Da PI: 5.616 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa17g095120.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 66.8 | 2.2e-21 | 8 | 57 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s ++++s+R+ +i+ KAe LSvLC+++v+vi+++++g l+++++
Csa17g095120.1 8 SSSSYSLTSTSLSNRLLTIFRKAEQLSVLCQIDVCVIYYGPEGDLKTFPN 57
799*********************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MRPSSSSSSS SYSLTSTSLS NRLLTIFRKA EQLSVLCQID VCVIYYGPEG DLKTFPNEKE 60 KVRNMAMRYS RLDETLRSXS KKRTHLSEFL EENPNKRMKT SPSPEKKNVD VLKYPISDHY 120 SPDQISQLIQ SLELNLSTSQ QRLRFLLESH DKRKLLDQNL ASSSSQNHQT QSLNPSQQFS 180 LLVYNHGDNT FSQIPVSASN LSQDLSALLQ ESQLKNELMK QELSDYDQNI CMSDITNNSF 240 QHPCVSETEH YSGVQESVNN FGMQKEFYGY DQNMSSMANI NSISSSVSNT EAVQESVNNY 300 GLNQLMQKQF YGCDQNMSSM GNSGLMQHEV YGYDQNL*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |