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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa17g093080.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
NAC |
| Protein Properties |
Length: 308aa MW: 34562.5 Da PI: 6.2581 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa17g093080.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 164.1 | 5.2e-51 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF Ptdeel+v+yL+kk++g +++l + i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk + +
Csa17g093080.1 14 LPPGFRFYPTDEELMVQYLCKKAAGYDFSL-QLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST- 106
79***************************9.89***************8888899*********************************999988. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+ vg+kk Lvfy g+apkg+kt+W+mheyrl
Csa17g093080.1 107 EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRL 139
999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MGMQETDPLT QLSLPPGFRF YPTDEELMVQ YLCKKAAGYD FSLQLIAEID LYKFDPWVLP 60
NKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIISTEGQR VGIKKALVFY 120
IGKAPKGTKT NWIMHEYRLI EPSRKNGSSK LDDWVLCRIY KKQSSAQKQV YDNVMNGGRE 180
LSNNGTSSTT SSSSHFEDVL DSFHHQIDNR NFQFSNQNQF STLRPDLTEE KNGFNGLADT 240
PSFDWGGGFA GNVEHNSVPE LGTSHVVPSL EYNCGYLKTE EEVESSLGFN NSVGFGYSGQ 300
VGGFGFM*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-122 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factors that bind specifically to the 5'-CATGTG-3' motif. {ECO:0000269|PubMed:15319476}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by drought, high salinity and abscisic acid (ABA). Slightly up-regulated by jasmonic acid. Not induced by cold treatment. {ECO:0000269|PubMed:12646039, ECO:0000269|PubMed:15319476}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY065268 | 0.0 | AY065268.1 Arabidopsis thaliana putative NAM protein (At1g52890) mRNA, complete cds. |
| GenBank | AY117224 | 0.0 | AY117224.1 Arabidopsis thaliana putative NAM protein (At1g52890) mRNA, complete cds. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Zheng XY, et al.
Coronatine promotes Pseudomonas syringae virulence in plants by activating a signaling cascade that inhibits salicylic acid accumulation.
Cell Host Microbe, 2012. 11(6): p. 587-96
[PMID:22704619] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Guan Q,Yue X,Zeng H,Zhu J
The protein phosphatase RCF2 and its interacting partner NAC019 are critical for heat stress-responsive gene regulation and thermotolerance in Arabidopsis.
Plant Cell, 2014. 26(1): p. 438-53
[PMID:24415771] - Chen F, et al.
Arabidopsis Phytochrome A Directly Targets Numerous Promoters for Individualized Modulation of Genes in a Wide Range of Pathways.
Plant Cell, 2014. 26(5): p. 1949-1966
[PMID:24794133] - Wang T, et al.
Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
Plant Physiol., 2015. 169(2): p. 1027-41
[PMID:26243618] - Zhu X, et al.
Jasmonic acid promotes degreening via MYC2/3/4- and ANAC019/055/072-mediated regulation of major chlorophyll catabolic genes.
Plant J., 2015. 84(3): p. 597-610
[PMID:26407000] - Takasaki H, et al.
SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence.
Plant J., 2015. 84(6): p. 1114-23
[PMID:26518251] - Gimenez-Ibanez S, et al.
JAZ2 controls stomata dynamics during bacterial invasion.
New Phytol., 2017. 213(3): p. 1378-1392
[PMID:28005270] - Ueda M, et al.
The Distinct Roles of Class I and II RPD3-Like Histone Deacetylases in Salinity Stress Response.
Plant Physiol., 2017. 175(4): p. 1760-1773
[PMID:29018096] - Kang M, et al.
The C-Domain of the NAC Transcription Factor ANAC019 Is Necessary for pH-Tuned DNA Binding through a Histidine Switch in the N-Domain.
Cell Rep, 2018. 22(5): p. 1141-1150
[PMID:29386103] - Sukiran NL,Ma JC,Ma H,Su Z
ANAC019 is required for recovery of reproductive development under drought stress in Arabidopsis.
Plant Mol. Biol., 2019. 99(1-2): p. 161-174
[PMID:30604322]
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