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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa17g092430.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
M-type_MADS |
Protein Properties |
Length: 347aa MW: 39523 Da PI: 7.9301 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa17g092430.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 61.5 | 9.7e-20 | 8 | 57 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s ++++ +R+ +i+ KAe LS+LC+++v+vi+++++g l+++++
Csa17g092430.1 8 SSSSYSLTSTSLNNRLLTIFRKAEQLSILCEIDVCVIYYGPQGDLKTFPN 57
6899********************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MRPSSSPSSS SYSLTSTSLN NRLLTIFRKA EQLSILCEID VCVIYYGPQG DLKTFPNEKE 60 KVRNMAMRYS RLDESLRGKK RTHLSEFLEE NPNPNKRMKT SPSPKKNVDV LKYPIADHYS 120 PDQISQLIQS LELNLSTSQQ RLRFLLESHD KHKLLDHHHH QSLASSSSQN HQTQSLNPNP 180 RQFSLFMYNH GDNTLSQIPV SASNLSQDFS ALLQESQLKN QLMKHELSDY DHNISMSDIT 240 NNSFQHPCVS KTKHYSGVQE SVNNFGMNQK EFYGYDQNMC SMANINSSSS FQHPCVSNTK 300 AVQESVNNYG LNQLTQKQFY GCDQNMSSMG NSGLMQHQVY GYDQNQ*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |