 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa17g046030.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
Family |
bHLH |
Protein Properties |
Length: 276aa MW: 31720.1 Da PI: 5.6164 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa17g046030.1 | genome | CSGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 23.6 | 9.1e-08 | 157 | 201 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++ r+RR+ri ++ +eL +l+P + +K + ae+ + A +Y+k Lq
Csa17g046030.1 157 SIAARKRRRRITEKTHELGKLIPGS-----QKHNTAEMFQAAAKYVKFLQ 201
6788*******************98.....8******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MDCLSYFSNS DAIQLEDCFI PELDTFFFQA QPQHQLHQPL HLEEALSPSL CEFSHFYEPF 60 LPPQDIFLPS PKTEVFNESQ DLDAFFPTPK HQKLINSSFH FNTNDPFFPS PNPNLLDSFI 120 TETSNFSEFL VPDFSPAFKV GWSDKCDTKK PELSAQSIAA RKRRRRITEK THELGKLIPG 180 SQKHNTAEMF QAAAKYVKFL QAQIEIFQLK QTNVQTWESS KVGREMQFLL ASQGIQEKLS 240 TEEVCVVPRE MVQVLKAEEC ILRNPRISRD LNKLL*
|
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 160 | 164 | RKRRR |
2 | 161 | 166 | KRRRRI |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF488587 | 1e-173 | AF488587.1 Arabidopsis thaliana clone bHLH052 putative bHLH transcription factor mRNA, complete cds. |