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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa17g028970.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
bZIP |
| Protein Properties |
Length: 416aa MW: 47349.3 Da PI: 5.9187 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa17g028970.1 | genome | CSGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 29.7 | 1.4e-09 | 128 | 168 | 4 | 44 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
+k rr+++NReAAr+sR+RKka +++Lee +L++ ++
Csa17g028970.1 128 DKMKRRLAQNREAARKSRLRKKAHVQQLEESRLKLSQLEQE 168
7899*************************987777766554 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MGCVSVSNVI FKDSRLDLYL WKAELEILFL QIVDLQMLSS SSSSTQVETF RDMGMYEPFQ 60
QLSGWENPFK SDVNNISNNQ SSSTTLEVDA RPEADDNNRA NYTSLYNNNS VEAEPSSNND 120
QDEDRINDKM KRRLAQNREA ARKSRLRKKA HVQQLEESRL KLSQLEQELV RARQQGLCVR 180
NSSDTSYLGP AGNINSGIAA FEMEYTHWLE EQNKRVSEIR TALQAHISDI ELKMLVDTCL 240
NHYANLFRMK ADAAKADVFF LMSGMWRTST ERFFQWIGGF RPSELLNVVM PYIEPLTDQQ 300
LLAVRNLQQS SQQAEEALSQ GLDKLQQGLV ESIAVQIKVV ESMNHGAQMA SAMENLQALE 360
SFVNQADHLR QQTLQQMSKI LTTRQSARGL LALGEYFHRL RALSSLWAAR PREHT*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. {ECO:0000269|PubMed:12897257}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | ATHTAGIA | 0.0 | L10209.1 Arabidopsis thaliana transcription factor mRNA, complete cds. |
| GenBank | BT026034 | 0.0 | BT026034.1 Arabidopsis thaliana At1g22070 mRNA, complete cds. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Gangadharan A,Sreerekha MV,Whitehill J,Ham JH,Mackey D
The Pseudomonas syringae pv. tomato type III effector HopM1 suppresses Arabidopsis defenses independent of suppressing salicylic acid signaling and of targeting AtMIN7.
PLoS ONE, 2013. 8(12): p. e82032
[PMID:24324742] - Herrera-Vásquez A, et al.
Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
Plant Mol. Biol. Rep., 2018.
[PMID:26696694] - Fang H, et al.
The Ca2+ /calmodulin2-binding transcription factor TGA3 elevates LCD expression and H2 S production to bolster Cr6+ tolerance in Arabidopsis.
Plant J., 2017. 91(6): p. 1038-1050
[PMID:28670772] - Sarkar S, et al.
Interaction of Arabidopsis TGA3 and WRKY53 transcription factors on Cestrum yellow leaf curling virus (CmYLCV) promoter mediates salicylic acid-dependent gene expression in planta.
Planta, 2018. 247(1): p. 181-199
[PMID:28913593]
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