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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa17g026520.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WOX |
Protein Properties |
Length: 401aa MW: 45419.7 Da PI: 6.7108 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa17g026520.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 79 | 139 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+t+t++ql++Le+ +e+ + +p++++++e+A++l ++te++V++WFqNrRa+ k+
Csa17g026520.1 79 RHRWTPTSTQLQILESIYEEgSGTPNRRRIREIATELsehgQITETNVYNWFQNRRARSKR 139
89*****************99**************************************97 PP
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2 | Homeobox | 62.3 | 7.5e-20 | 278 | 338 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+t+t++ql++Le+ +++ + +p+ ++++e+A++l ++ e++V++WFqNrRa+ k+
Csa17g026520.1 278 RHRWTPTSKQLQILENIYKEgSGTPNPRRIKEIATELsehgQIMEKNVYNWFQNRRARSKR 338
89*****************99**************************************97 PP
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3 | Wus_type_Homeobox | 100.3 | 1.4e-32 | 78 | 141 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+r+RWtPt++Q++iLe++y++G tPn+++i++i++eL+e+G+i+++NV++WFQNr+aR+++kq
Csa17g026520.1 78 SRHRWTPTSTQLQILESIYEEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQ 141
689***********************************************************97 PP
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4 | Wus_type_Homeobox | 100.8 | 9.9e-33 | 277 | 340 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+r+RWtPt++Q++iLe++yk+G tPn ++i++i++eL+e+G+i++kNV++WFQNr+aR+++kq
Csa17g026520.1 277 TRHRWTPTSKQLQILENIYKEGSGTPNPRRIKEIATELSEHGQIMEKNVYNWFQNRRARSKRKQ 340
689***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MEREMQNDAY NGRGRVMTEE QMEILRKQIA VYAVICDQLV LLHNSLSSYH PFSSGMRPMV 60 GGYFDPMGSS SSSHRISSRH RWTPTSTQLQ ILESIYEEGS GTPNRRRIRE IATELSEHGQ 120 ITETNVYNWF QNRRARSKRK QPQTTTTANG QTDDVAVTTE ERRSCGDSGG LESYEHILFP 180 SPDLGIEHLK ERGESKFVKE EMEQGSLNGT YDGRVMTEEQ METLRKQIAI YAIICDQLVV 240 LHNSLSSFPP LSSGMNLMGG GYFDPMVASS SAHGMSTRHR WTPTSKQLQI LENIYKEGSG 300 TPNPRRIKEI ATELSEHGQI MEKNVYNWFQ NRRARSKRKQ PQTTTVTGPT DDAAVTTEER 360 SYGDSGGFES YEHILFPSPD RGIEHLLSRE KFMENKFPTG *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 331 | 339 | RRARSKRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ441297 | 0.0 | AJ441297.1 Arabidopsis thaliana mRNA for homeodomain protein PALE-2 (pale-2 gene). |