 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa17g011330.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
LBD |
| Protein Properties |
Length: 194aa MW: 21593.6 Da PI: 5.0201 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa17g011330.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 137 | 6.9e-43 | 34 | 132 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r+da++s+vyeAear+rdPvyG++g i +lq+q+++l+aela
Csa17g011330.1 34 PCAACKILRRRCAEKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVKSMVYEAEARIRDPVYGSAGAIYHLQRQVSELQAELA 128
7********************************************************************************************** PP
DUF260 96 llke 99
+++
Csa17g011330.1 129 KAQV 132
9986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MESNGDAAAA TTPIIISSSS SPPPPLSPRV VLSPCAACKI LRRRCAEKCV LAPYFPPTDP 60
AKFTIAHRVF GASNIIKFLQ ELPESQRTDA VKSMVYEAEA RIRDPVYGSA GAIYHLQRQV 120
SELQAELAKA QVEMVNMQLQ RSNLLELIYN MEQVQKKQEQ DNMSFESNDL GFLDDNSNTN 180
TNTSMLWWDP LWT*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB473841 | 0.0 | AB473841.1 Arabidopsis thaliana ASL8 mRNA for ASYMMETRIC LEAVES2-like 8 protein, complete cds. |
