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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa17g007050.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
bZIP |
| Protein Properties |
Length: 289aa MW: 32401.2 Da PI: 5.9527 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa17g007050.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 58.1 | 1.9e-18 | 204 | 265 | 2 | 63 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +r++r++kNRe+A rsR+RK+a++ eLe+ +++Le+eN++L ke+ee +ke +k +ev
Csa17g007050.1 204 AAAQRQKRMIKNRESAARSRERKQAYQVELETLAAKLEEENEQLLKEIEESTKERYKKLMEV 265
5789***************************************************9988775 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MASFKMMSSS NSDLSRRNSS SASSSPSIRS SSHHLRPNLH TDHSRISFAY GGGNDYTFAS 60
DSKPLDMAVD TAERSIGDRN SVNNGKSVDD VWKEIVSGEQ KRIMMKEEAH DDVIMTLEDF 120
LAKAAMDDVD GDAANMDSDE IDVKIPPERL NNDGSYTFDF PMMPQTQPQP QRHSSFQMIE 180
GSMGGGGGVR GKRGRVMMEA MDKAAAQRQK RMIKNRESAA RSRERKQAYQ VELETLAAKL 240
EEENEQLLKE IEESTKERYK KLMEVLIPVD EKPRPSSRSL CRSHSLEW*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC003027 | 1e-124 | AC003027.1 Arabidopsis thaliana chromosome I BAC F21M11 genomic sequence, complete sequence. |
| GenBank | AY087603 | 1e-124 | AY087603.1 Arabidopsis thaliana clone 36980 mRNA, complete sequence. |
| GenBank | BT024495 | 1e-124 | BT024495.1 Arabidopsis thaliana At1g03970 mRNA, complete cds. |
| GenBank | CP002684 | 1e-124 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
| GenBank | U01823 | 1e-124 | U01823.1 Arabidopsis thaliana Columbia bZIP protein GBF4 gene, complete cds. |
