PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Csa16g051210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family | EIL | ||||||||
Protein Properties | Length: 403aa MW: 46321.6 Da PI: 5.0256 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 160.2 | 2.5e-49 | 50 | 146 | 1 | 100 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el+krmw+d+m+lkrlke++ + + ke+ ++ +k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WW Csa16g051210.1 50 DELEKRMWRDKMRLKRLKEQQSK-C--KEEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWW 141 79******************997.5..66669*************************************************************** PP XXXXX CS EIN3 96 kekve 100 k+kv+ Csa16g051210.1 142 KDKVS 146 ***97 PP | |||||||
2 | EIN3 | 33.4 | 8.6e-11 | 147 | 257 | 272 | 354 |
XXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX...........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.X CS EIN3 272 pkvtlsceqkedve.gkkeskikhvqavktta...........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgse 338 ++ +++ +++dve +ke+ +++++k + ++++ rkrk++++ + +++++ + +tc++ q+++ + Csa16g051210.1 147 GSLLINDCSEYDVEgFEKEQPSFDMEERKPEIvmmnpptsfgiakmqhfpikeevatigNLEFSRKRKQNNDMNVMIMDRPAGYTCENGQCPHGK 241 577889999*****87777777899999987799************************************************************* PP XXXXXXXXXXXXXXXX CS EIN3 339 telifadknsisqney 354 ++l+f+d++s++++++ Csa16g051210.1 242 MNLGFQDRSSRDNHQM 257 **************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.3E-44 | 50 | 146 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence Send to blast |
MMMFNEMGMY GNMDFFPTST PLDVCPLPQA EQEPVLVEDV DYTDDEMDVD ELEKRMWRDK 60 MRLKRLKEQQ SKCKEEGVDG SKQRQSQEQA RRKKMSRAQD GILKYMLKMM EVCKAQGFVY 120 GIIPEKGKPV TGASDNLREW WKDKVSGSLL INDCSEYDVE GFEKEQPSFD MEERKPEIVM 180 MNPPTSFGIA KMQHFPIKEE VATIGNLEFS RKRKQNNDMN VMIMDRPAGY TCENGQCPHG 240 KMNLGFQDRS SRDNHQMVCP YRDNRVAYGA SKFHVGEMRP QQSIDLSVFG VPENGQKMIT 300 ELMAMYDRNV QSSQTPPPLM VNQSMTLDAK PAQNQQLSFN SGNQMFMQQG TNSMVSNRCQ 360 MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQRGASI WF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 209 | 214 | SRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Csa16g051210.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC005623 | 0.0 | AC005623.3 Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete sequence. | |||
GenBank | AF004213 | 0.0 | AF004213.1 Arabidopsis thaliana ethylene-insensitive3-like1 (EIL1) mRNA, complete cds. | |||
GenBank | AY065191 | 0.0 | AY065191.1 Arabidopsis thaliana ethylene-insensitive3-like1 (EIL1) (At2g27050; T20P8.10) mRNA, complete cds. | |||
GenBank | BT003344 | 0.0 | BT003344.1 Arabidopsis thaliana ethylene-insensitive3-like1 (EIL1) (At2g27050) mRNA, complete cds. | |||
GenBank | CP002685 | 0.0 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010473094.1 | 1e-180 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q9SLH0 | 1e-147 | EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | D7LFJ4 | 1e-151 | D7LFJ4_ARALL; Uncharacterized protein | ||||
STRING | XP_010473094.1 | 1e-179 | (Camelina sativa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18735 | 3 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-149 | ETHYLENE-INSENSITIVE3-like 1 |