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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa16g037700.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
bHLH |
Protein Properties |
Length: 266aa MW: 29782 Da PI: 7.8094 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa16g037700.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28.4 | 3e-09 | 161 | 208 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+++Er RR +iN+++ L++++P + k + a++L + ++Y++sLq
Csa16g037700.1 161 SHSIAERARRGKINERLKCLQDIVPGC----YKTMGMATMLDEIINYVQSLQ 208
8*************************9....356999**************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MANLSSDFQT YTMDDPIAQL AQLSNTLHHF QSFPPFSSPL DSLFFHHQIS NHFPGKSPEN 60 DFNHHHQGIF LPSNALNNEE SSSRVDTKKR KTFMEAVSTS ENSVSDQTLS SSSAAQVSLN 120 GKLLTKNSSS SKRGKRSKNR EEEKEREVVH VRARRGQATD SHSIAERARR GKINERLKCL 180 QDIVPGCYKT MGMATMLDEI INYVQSLQNQ VEFLSMKITA ASSYYDFNSE TDAVESMQRA 240 KAREAVEMGQ GRDGNPVFHS SSWTL*
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Functional Description ? help
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Source |
Description |
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK118781 | 0.0 | AK118781.1 Arabidopsis thaliana At1g73830 mRNA for putative bHLH transcription factor (bHLH050), complete cds, clone: RAFL21-11-M10. |
GenBank | BT006055 | 0.0 | BT006055.1 Arabidopsis thaliana clone U51368 putative helix-loop-helix DNA-binding protein (At1g73830) mRNA, complete cds. |