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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa16g030850.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
NAC |
| Protein Properties |
Length: 273aa MW: 31679.8 Da PI: 6.7439 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa16g030850.1 | genome | CSGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 174.2 | 3.8e-54 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeel+v+yL++++ +k++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfFs+r++ky++g r+nra+ sgyWkatg+dk+++s
Csa16g030850.1 9 LPPGFRFHPTDEELIVYYLRNQTMSKPCPV-SIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHS- 101
79****************************.89***************99999*****************************************. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++vg+kk Lvfykgr pkg ktdW+mheyrl
Csa16g030850.1 102 GTSNVGVKKALVFYKGRPPKGIKTDWIMHEYRL 134
999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MEVNSSSSLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD PWQLPEKTEF 60
GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH SGTSNVGVKK ALVFYKGRPP 120
KGIKTDWIMH EYRLHDSRKA STKRSGSMRL DEWVLCRIYK KRGAGRLLDE KESFVDEVLM 180
NEATVVVDDE VERRNEEEIT MMTSTTKLPR TCSLAHLLEM DYMGPISHIL TDNFSQLDHH 240
LHQPDSESGW FGDLQFNQDE ILNHHRQAMF KF*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-70 | 8 | 166 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-70 | 8 | 166 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-70 | 8 | 166 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-70 | 8 | 166 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 8e-70 | 8 | 166 | 19 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 6e-70 | 8 | 166 | 16 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 6e-70 | 8 | 166 | 16 | 170 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds to, and transactivates the promoter of the abscisic aldehyde oxidase AAO3. Promotes chlorophyll degradation in leaves by enhancing transcription of AAO3, which leads to increased levels of the senescence-inducing hormone abscisic acid (ABA) (PubMed:25516602). Involved in the control of dehydration in senescing leaves. Binds to the DNA sequence 5'-CACGTAAGT-3' of SAG113 promoter. SAG113 acts as negative regulator of ABA signaling for stomatal closure in leaves, and controls water loss during leaf senescence (PubMed:22184656). Transcription factor of the NAC family involved in senescence. May function in the transition between active cell division and cell expansion (PubMed:16640597). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:16640597, ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:22184656, ECO:0000269|PubMed:25516602}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by the heterodimer APETALA3 (AP3)/PISTILLATA (PI) (PubMed:9489703). Induced by senescence (PubMed:22184656, PubMed:24659488, PubMed:25516602). Induced by abscisic acid (ABA) (PubMed:22184656, PubMed:25516602). Induced by ethylene (PubMed:25516602). {ECO:0000269|PubMed:22184656, ECO:0000269|PubMed:24659488, ECO:0000269|PubMed:25516602, ECO:0000269|PubMed:9489703}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY086124 | 0.0 | AY086124.1 Arabidopsis thaliana clone 21634 mRNA, complete sequence. |
| Publications
? help Back to Top |
- Zhang K,Gan SS
An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves.
Plant Physiol., 2012. 158(2): p. 961-9
[PMID:22184656] - Zhang K,Halitschke R,Yin C,Liu CJ,Gan SS
Salicylic acid 3-hydroxylase regulates Arabidopsis leaf longevity by mediating salicylic acid catabolism.
Proc. Natl. Acad. Sci. U.S.A., 2013. 110(36): p. 14807-12
[PMID:23959884] - Shinozaki Y, et al.
Expression of an AtNAP gene homolog in senescing morning glory (Ipomoea nil) petals of two cultivars with a different flower life span.
J. Plant Physiol., 2014. 171(8): p. 633-8
[PMID:24709156] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
Plant Physiol., 2015. 169(2): p. 1275-91
[PMID:26304848] - Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
Plant Cell Rep., 2016. 35(1): p. 155-66
[PMID:26441053] - Seok HY, et al.
Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
Planta, 2017. 245(2): p. 329-341
[PMID:27770200]
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