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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa16g028870.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
bZIP |
Protein Properties |
Length: 139aa MW: 16265.5 Da PI: 10.6008 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa16g028870.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 41.2 | 3.5e-13 | 45 | 100 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
+ ++ rrk +NRe+ArrsR RK+ ++eeL +L +eNk L +el + k+ ++k
Csa16g028870.1 45 DERKRRRKVSNRESARRSRMRKRRRMEELWSMLVQLINENKCLVDELGRAKEGYDK 100
5577899*******************************************998876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 139 aa
Download sequence Send
to blast |
MAGFVYNLPS ANPSPQSFFK TFGDRVPLVN LPATSDESNR SAEDDERKRR RKVSNRESAR 60 RSRMRKRRRM EELWSMLVQL INENKCLVDE LGRAKEGYDK VIEENMKLRE ENSKSRKMIG 120 EIRLNRFLNV DGDKIWTV*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 49 | 68 | RRKVSNRESARRSRMRKRRR |
2 | 64 | 68 | RKRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493528 | 1e-121 | AB493528.1 Arabidopsis thaliana At1g68880 mRNA for hypothetical protein, partial cds, clone: RAAt1g68880. |
GenBank | AC011665 | 1e-121 | AC011665.8 Arabidopsis thaliana chromosome 1 BAC T6L1 genomic sequence, complete sequence. |
GenBank | AC011914 | 1e-121 | AC011914.9 Arabidopsis thaliana chromosome 1 BAC F14K14 genomic sequence, complete sequence. |
GenBank | AF400621 | 1e-121 | AF400621.1 Arabidopsis thaliana transcription factor-like protein bZIP8 mRNA, complete cds. |
GenBank | BT024817 | 1e-121 | BT024817.1 Arabidopsis thaliana At1g68880 gene, complete cds. |
GenBank | CP002684 | 1e-121 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |