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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa15g040470.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
CPP |
Protein Properties |
Length: 617aa MW: 67194.7 Da PI: 7.8383 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa15g040470.1 | genome | CSGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 51 | 3e-16 | 328 | 366 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+CnCkkskClk+YCeCfaag++C e C+C dC+Nk
Csa15g040470.1 328 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKP 366
689**********************************96 PP
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2 | TCR | 51.3 | 2.4e-16 | 413 | 451 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN
Csa15g040470.1 413 RHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNA 451
589***********************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 617 aa
Download sequence Send
to blast |
MDTPEKSITQ IGTPVSKLKS EDSPVFNYIC NLSPIKTLKS IPIAQTLSSL NFTSPPSVFT 60 SPHAVSHKES RFRSQINKDV VASVGEEVKE EALTGNEPSQ NVKNDFSTPK VSNDVRGGGN 120 GSCEDGGMDL LKMCDNVKKK SDTPDWETLI AATTELIYGS PSESEAFSCL MKRRSNSGAR 180 VRGGGGTKST LEEPVSSTVV ANNETESFDA NSILHRGVRR RCLDFEVPGN NQQTLGESSS 240 SCVVPSIGLH LNAIAMSSKD NNVANEYSLS GNIKVGLQSS TSPVLHSQQD AGQAVEEFPI 300 SSALVEINPI SAKKKRRKSE QSGEGEASCK RCNCKKSKCL KLYCECFAAG VYCIEPCSCI 360 DCFNKPIHED VVLATRKQIE SRNPLAFAPK VIRNSDSIIE VGDDTSKTPA SARHKRGCNC 420 KKSNCLKKYC ECYQGGVGCS INCRCEGCKN AFGRKDGSLF EQDEENEVSA KRVTAKTQQN 480 VELFNPVVPP STPIPFRQPL SQLPISSNNR LLPPVEHFHH GASGSSSSGI YNIRKQDMSM 540 VSHSRIEIIS EDIDDDMPEN LLNHSPMTNM KAVVSPNRKR VSLPHLDSSE ETPWRRNGGR 600 KLIHSIPTFP SLTPHH*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 312 | 316 | KKKRR |
2 | 312 | 317 | KKKRRK |
3 | 313 | 317 | KKRRK |
Functional Description ? help
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Source |
Description |
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |