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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa15g027790.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
M-type_MADS |
Protein Properties |
Length: 408aa MW: 46442.6 Da PI: 6.2574 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa15g027790.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 65.7 | 4.9e-21 | 8 | 57 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s ++++s+R+ +i+ KAe LSvLC+++v+vi+++++g l+++++
Csa15g027790.1 8 SSSSYSLTSTSLSNRLLTIFRKAEQLSVLCEIDVCVIYYGPQGDLKTFPN 57
799*********************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MRPSSSSSSS SYSLTSTSLS NRLLTIFRKA EQLSVLCEID VCVIYYGPQG DLKTFPNEKE 60 KVRNMAMRYS RLDESLRSKK RTHLSEFLEE NPNKRMKTSP SPEKNVDVLK YPISDHYSPD 120 QISQLIQSLE LNLSTSQQRL RFLLESHEKH KLLDHHHHQS LASSSSQNHQ TQSLNPSQKF 180 SLFMYNHGDN NLSQIPVSAS NLSQDFSALL EESHLKNQLM KQELSDCDQN ICMSDITNNS 240 FQHPCVLETE HTQGSFQHPC VSNTEAVQES VNNYGLNQLM QNQFYACDQN MSSIMGNSGL 300 MQHEFSTSLR LRNRTYSGVQ ESFGMNQLMQ KEFYGYDQNM SSMGIINSSS FQHPCVSNTE 360 AVQESVNNYG LNQLMQNQFY ACDQNMSSIM GNSGLMQHEV YGYDQNL*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |