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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa15g025250.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
M-type_MADS |
Protein Properties |
Length: 401aa MW: 45102.4 Da PI: 9.5837 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa15g025250.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 77.6 | 8.9e-25 | 36 | 83 | 4 | 51 |
-SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
++s r ++++kRr++++KKA+ELSvLC+++v+vi+++++g+l+++++
Csa15g025250.1 36 ASSSARATSLIKRRETVFKKANELSVLCGIDVCVIYYGPDGELKTWPK 83
68999*****************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MVSFSSCSPS TSSSTKKDSM RFPQTQQTVF KKPYSASSSA RATSLIKRRE TVFKKANELS 60 VLCGIDVCVI YYGPDGELKT WPKEREKVTA LALRYCGLSE RKRRKGCVDL YEFIDKINKD 120 DSKKKQKKPK KEKPVRRVAK VKYPVWDPRF DNYSAEQLSG LVQSLERNLT RLQQRVRAVV 180 EGHGQRKIQY LNMASQGPMM PSTMNQYFQQ QPNQHVSMFL YNHGNGNVSQ IPVSASALNQ 240 GQSLAPVPSE LMIHPNQDVG NYSGSLGGQG TGINGFQNMN MLTYNNINSF NGFSKPIDQN 300 SRVGSYSSLL EDGIDEFEDS HNNFNAEDYS GFLGAQGTVT NGMQNMNMHD YNNNNYNSVN 360 ANGHSHQFGQ FQTQQQHGTF NWDQPGSNFR SLYDLPQPLQ *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 102 | 126 | RRKGCVDLYEFIDKINKDDSKKKQK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |