 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa15g014730.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
B3 |
| Protein Properties |
Length: 254aa MW: 28913.2 Da PI: 9.8704 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa15g014730.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 57.9 | 1.8e-18 | 50 | 142 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
+++++l+++ l lp+ f +++g+++++ +++l +e+g W++ + k +g++++++GW++F+ +n+L+++D++++kl++ +++++v+++++
Csa15g014730.1 50 SRVTASNLRKDSLFLPRGFSRSNGLVNRK-CEIILLNEDGIPWKLIPS-HKPDGEVYIRNGWRSFCFENRLRVNDVLTLKLVE-TGTTPVLHLCS 141
5678999999***************9766.5**************994.34444599***********************998.88889***998 PP
S CS
B3 99 k 99
+
Csa15g014730.1 142 S 142
6 PP
|
| 2 | B3 | 41.1 | 3.2e-13 | 154 | 246 | 5 | 97 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..EEEEE CS
B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelvvkvf 97
+++++++k+ l+lp +f++++g+++++ ++tl d+ g + + l+ + k g++ l+k W+eF++ ng++ g+++ ++l+++ ++++ ++k++
Csa15g014730.1 154 TLRPYNFKKYKLCLPGTFVKANGIENAR--KITLVDRYGIRRTTSLKPDDKHGKMRLGKEWREFCDVNGVNIGESFKLELIKErkDTANHLLKFC 246
568999****************988555..8********888888877999999*************************9955344555555555 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MYTLVKLNCN TKILFKFSSK VETDSDSDSE KNQNTADEGS SSDHHSCFVS RVTASNLRKD 60
SLFLPRGFSR SNGLVNRKCE IILLNEDGIP WKLIPSHKPD GEVYIRNGWR SFCFENRLRV 120
NDVLTLKLVE TGTTPVLHLC SSSTTSQCRL LTLTLRPYNF KKYKLCLPGT FVKANGIENA 180
RKITLVDRYG IRRTTSLKPD DKHGKMRLGK EWREFCDVNG VNIGESFKLE LIKERKDTAN 240
HLLKFCSKVL NFP*
|
