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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa14g038430.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WRKY |
Protein Properties |
Length: 434aa MW: 46860.6 Da PI: 5.113 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa14g038430.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98.5 | 4.3e-31 | 216 | 274 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs+fpr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
Csa14g038430.1 216 SDLWAWRKYGQKPIKGSPFPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 274
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 434 aa
Download sequence Send
to blast |
MCSVSELLDM DSFQGDLTDV VRGIGGHVLS PETPPQNIWP LPLTHPPPSP SSDLHINPFG 60 DPFVSMNDPL LQELNAVTNS SYFSTVGDNN NTNNNGFLVP KVFEEDHIKS QCSIFPRIRI 120 SHSNIIHDSS PCNSPAMSAH AVAAAAAASP RGIINVDTNS PRNCLLVDGN TFSSQIQISS 180 PRNLGLKRRK SQAKKVVCIP APAAMNSRSS GEVVPSDLWA WRKYGQKPIK GSPFPRGYYR 240 CSSSKGCSAR KQVERSRTDP NMLVITYTSE HNHPWPIQRN ALAGSTRSSS SSTNPNSSKS 300 PTANANAVAT SIGSQNTTYL PSSATPPPPP PPVSVSSVKD ERGDDMELEN VEDDDDIAPY 360 RPELHDHQNQ PDDFFADLEE LEGDSLSMLL SQGCAGDGKD KKMASDGISD FFGWSGDNSN 420 NNNNNDDQES RSL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK228343 | 0.0 | AK228343.1 Arabidopsis thaliana mRNA for putative DNA-binding protein, complete cds, clone: RAFL14-76-G23. |
GenBank | BT006468 | 0.0 | BT006468.1 Arabidopsis thaliana At1g30650 gene, complete cds. |