PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa14g028010.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family ERF
Protein Properties Length: 145aa    MW: 15845.5 Da    PI: 5.5162
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa14g028010.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.8e-171161155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykG+r++k +g+Wv+eIr+p +   r r +lg+f tae+Aa a++ a  +l++
  Csa14g028010.1 11 PKYKGIRRRK-WGKWVSEIRVPGT---RDRLWLGSFSTAEGAAVAHDVAFFCLHQ 61
                    79*****998.**********943...5*********************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.0E-91159IPR001471AP2/ERF domain
CDDcd000184.46E-281173No hitNo description
SMARTSM003803.7E-331277IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-171272IPR016177DNA-binding domain
PROSITE profilePS5103221.5491271IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-251272IPR001471AP2/ERF domain
PRINTSPR003676.8E-91324IPR001471AP2/ERF domain
PRINTSPR003676.8E-93551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MDYRESDETQ PKYKGIRRRK WGKWVSEIRV PGTRDRLWLG SFSTAEGAAV AHDVAFFCLH  60
QPDSLESLNF PHLLNPSMAS KTSPRSIQQA ASNAGMAIDA GIVHSASVNS GYGDTTTCYE  120
NGGADEVEPL NISVYDYLDG HDHV*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa14g028010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3251061e-144AF325106.1 Arabidopsis thaliana hypothetical protein (T22J18.2) mRNA, complete cds.
GenBankAY0866971e-144AY086697.1 Arabidopsis thaliana clone 26867 mRNA, complete sequence.
GenBankBT0246831e-144BT024683.1 Arabidopsis thaliana At1g22810 mRNA, complete cds.
GenBankCP0026841e-144CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
GenBankT22J181e-144AC003979.2 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010460046.11e-106PREDICTED: ethylene-responsive transcription factor ERF019-like
SwissprotO805424e-93ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLR0IGV57e-92R0IGV5_9BRAS; Uncharacterized protein
STRINGXP_010460046.11e-105(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38652860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-95ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]