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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa14g015200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
NAC |
| Protein Properties |
Length: 585aa MW: 67734.3 Da PI: 6.351 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa14g015200.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 177.3 | 4.1e-55 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
+ppGfrFhPtdeelv++yL+kkv++k++e+ ++ik++d+yk+ePwdL++ k+ +ee+ +wyfFs++dkky+tg+r+nratk+g+Wkatg+dk++
Csa14g015200.1 7 VPPGFRFHPTDEELVDYYLRKKVASKRIEI-DFIKDIDLYKIEPWDLQElcKIGHEEQsDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 100
69****************************.99**************9544444444359*********************************** PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+ +++l+g++ktLvfykgrap+g+k+dW+mheyrle
Csa14g015200.1 101 YL-RHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
**.8899****************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 585 aa
Download sequence Send
to blast |
MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH 60
EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YLRHSLIGMR KTLVFYKGRA 120
PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDRLS 180
FMASELETNG QRRILPNHHH QQQHEHQQHM PYGLNASAYA LNNPSLQCKQ EIELHYNHMV 240
QQNHLLGESH LSFFQLPQLE SPKIQQDNSN CNSLPYGTSN TNNNSSHNAN LQQSNIAHEE 300
QLNQGDQSFS SLYMNNXEEN TCVLQGKSPE WTKEEGWVVC RVFKKRLAAV RRMGDYDSSP 360
SHWYDDRLSF MASELETNGQ RRILPNHHHQ QQHEHQQHMP YGLNASAYAL NNPSLQCKQE 420
IELHYNHMVQ QNHLLGESHL SFFQLPQLES PKIQQDNSNC NSLPYGTSNT NNNSSHNANL 480
QQSNIAHEEQ LNQGDQSFSS LYMNNDNEQV MDQVTDWRVL DKFVASQLSN EEAATASASL 540
QNNAKETSNA EYQVDEEKDP KRVSDMGEEY AASTSSSCQI DLWK*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
