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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa13g048200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WRKY |
Protein Properties |
Length: 314aa MW: 35426.5 Da PI: 6.4182 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa13g048200.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 88.2 | 7.2e-28 | 136 | 196 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dD y+WrKYGqK++ g+++prsYYrCt++ C+++k+v+rs+ dp+++e+tY+g+H+++
Csa13g048200.1 136 DDVYSWRKYGQKDILGAKYPRSYYRCTFRntqCCWATKQVQRSDGDPTIFEVTYRGTHTCS 196
8**************************99776799************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MEMMNWEQRN LLNELIHGLR AAKQLQASPS PSSSSSSSCL TYEMKETLLQ KVVSSYEKAI 60 MMLNGSRNPT TERVMDPVVN SGKVPESPAS INESPKSEEF LDVGCKDYSC KKRKMLPKWT 120 EQVRISPERG LEGPHDDVYS WRKYGQKDIL GAKYPRSYYR CTFRNTQCCW ATKQVQRSDG 180 DPTIFEVTYR GTHTCSQQGN TTPHKRAETK QNQNHIEEVV NYQNNLLDNL RTNLTIRTDG 240 VEGHGFSFPV TPPPFYSYET FCHVGSSGPS DFTGLISTNT STGSSPIFDV DFHFDPTAEI 300 DTTDFPTFLH DSI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF442396 | 1e-107 | AF442396.1 Arabidopsis thaliana WRKY transcription factor 41 (WRKY41) mRNA, complete cds. |
GenBank | AY133686 | 1e-107 | AY133686.1 Arabidopsis thaliana clone C103116 (D) unknown protein (At4g11070) mRNA, complete cds. |
GenBank | BT001107 | 1e-107 | BT001107.1 Arabidopsis thaliana clone C103116 (A) putative WRKY family transcription factor (At4g11070) mRNA, complete cds. |