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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa13g039160.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
G2-like |
| Protein Properties |
Length: 415aa MW: 46865 Da PI: 5.605 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa13g039160.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.5 | 5.5e-32 | 232 | 286 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWtpeLHe+Fveav+qLGGs++AtPk++l+l++ + Lt++hvkSHLQkYR+
Csa13g039160.1 232 KQRMRWTPELHESFVEAVNQLGGSDRATPKAVLKLLNNPVLTIYHVKSHLQKYRT 286
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MTLANDFGYS TTMSSSFSAL HPTVEDRYRK FPNSFWVSGQ ELMNNPVPCQ SVSGGNSGGY 60
LFSSSSGFCN VSAVSPHGRN SQTQPPVSTV PRDRLAMQDC TLEAQSSSLI NHHQPQEFTD 120
PLQEFFDFSD HVPVQHLQAE ESGVRVDSSV ELHKKSEWQD WADQLISVDD GSEPNWSDFL 180
GDPRSHNQNS EIPMPFSDVP RQEIKANQQH QMVLSEEQLI GRNASSSVAT SKQRMRWTPE 240
LHESFVEAVN QLGGSDRATP KAVLKLLNNP VLTIYHVKSH LQKYRTARYK PETSEVTGEP 300
QEKKLTSMED IKSLDMKTSV EITQALRLQM EVQKRLHEQL EIQRTLQLQI EKQGRYLQMM 360
FEKQQKIQEN KSSCSEASPK QCNDTSAEVE FGLDTRTVEQ AESPSASRKR VRED*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 5e-26 | 232 | 290 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT002344 | 0.0 | BT002344.1 Arabidopsis thaliana clone C104936 unknown protein (At5g29000) mRNA, complete cds. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Bonnot C, et al.
A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana.
New Phytol., 2016. 209(1): p. 161-76
[PMID:26243630] - Aleksza D,Horváth GV,Sándor G,Szabados L
Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation.
Plant Physiol., 2017. 175(1): p. 555-567
[PMID:28765275]
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