 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa13g028610.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
Family |
WRKY |
Protein Properties |
Length: 275aa MW: 30684.6 Da PI: 6.4545 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa13g028610.1 | genome | CSGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 30.4 | 7.7e-10 | 116 | 146 | 2 | 30 |
--SS-EEEEEEE--TT-SS-..EEEEEE-ST CS
WRKY 2 dDgynWrKYGqKevkgsefp..rsYYrCtsa 30
+Dg++WrKYGqK++ g++fp r+ + C++a
Csa13g028610.1 116 EDGFSWRKYGQKDILGAKFPsyRGKHSCSQA 146
8******************955666777765 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MEKKSSNGDW EKMKREINEL MTEGRDYAHQ FRSASSQETR EHLAKKILES YHKSLTIMNY 60 SGEQDSSHAH DGGGSPKSDD SDQEPLVITK SSKKSMPKWT RKVIITPGAG IDRTLEDGFS 120 WRKYGQKDIL GAKFPSYRGK HSCSQAANVG STIPAQNLEP NQTQEHENLD IVKESLDNYN 180 HEAHLHHNLH YPMSSTPNLE SNNPYMLQMR DHNMDFFGST SFSSDLGTNI NYNFPASGSA 240 SHSTSNSPST IPLESPFDSY DPNHPYGGGF GGFY*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SUP6}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:22268143}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AY088401 | 1e-130 | AY088401.1 Arabidopsis thaliana clone 6469 mRNA, complete sequence. |