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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa13g025850.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
NAC |
Protein Properties |
Length: 239aa MW: 26932.3 Da PI: 6.1518 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa13g025850.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 137.4 | 9.4e-43 | 6 | 137 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+ GfrF Pt+eelv +yL++++eg++ +++++vi+ +d+++veP++Lp+ +++++ ++w+fF++r++++a+g r++r+t sgyWkatg+ +
Csa13g025850.1 6 TIGFRFYPTEEELVAFYLRNQLEGRSdVSVHRVIPVLDVFEVEPSHLPNmsgeRCRGDPEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGP 100
57**********************997788889***************545655556777*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v+sk+++ +g+kkt+vfy+g+ap+g+kt+W m+ey++
Csa13g025850.1 101 VFSKDNRMIGVKKTMVFYTGKAPTGRKTKWKMNEYKA 137
***********************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MADEVTIGFR FYPTEEELVA FYLRNQLEGR SDVSVHRVIP VLDVFEVEPS HLPNMSGERC 60 RGDPEQWFFF VPRQEREARG GRPSRTTGSG YWKATGSPGP VFSKDNRMIG VKKTMVFYTG 120 KAPTGRKTKW KMNEYKAVDE TVTASTIPQV RHEFSLCRVY VTTGSSRAFD RRPPVGVLQP 180 ERMLTNEVAV AGTSSFRAES SPDTSFSGGE QHVDLSMNVD LVEGLTEPIW EWEQLSWP*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
3swm_B | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
3swm_C | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
3swm_D | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
3swp_A | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
3swp_B | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
3swp_C | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
3swp_D | 3e-32 | 8 | 167 | 23 | 173 | NAC domain-containing protein 19 |
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