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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa13g020630.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WOX |
Protein Properties |
Length: 261aa MW: 28778.9 Da PI: 6.7045 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa13g020630.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 47 | 4.4e-15 | 18 | 78 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+++++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++
Csa13g020630.1 18 RSRWSPKPEQILILESIFNSgIVNPPKDETVRIRKMLekfgAVGDANVFYWFQNRRSRSRR 78
89*****************99*************************************997 PP
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2 | Wus_type_Homeobox | 106.5 | 1.7e-34 | 17 | 80 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+r+RW+P+peQi iLe++++sG+++P+k+e+ ri+++Le++G+++d+NVfyWFQNr++R+r++q
Csa13g020630.1 17 VRSRWSPKPEQILILESIFNSGIVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRRSRSRRRQ 80
589***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MDQEGASQST STSTEPVRSR WSPKPEQILI LESIFNSGIV NPPKDETVRI RKMLEKFGAV 60 GDANVFYWFQ NRRSRSRRRQ RQLQAATAAP ATSGGDQHMT AMSMHQYPYS NSEIDLGFGS 120 CINSSANYFL NGTTSSSQVS SFLLGLSSSS GVCETNGMEN LFTMHGHESH HHHQHSSNAH 180 SMFSSSDENS NFQYQQGLMT VFINGVPTEV TKGTIDMKAT FGEDSVLLHS SGLPLPTDEF 240 GFLMHSLQHG QAYFLVPRQT *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY251403 | 0.0 | AY251403.1 Arabidopsis thaliana WOX12 protein mRNA, complete cds. |