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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Csa13g017890.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
LBD |
Protein Properties |
Length: 320aa MW: 34591.7 Da PI: 5.3216 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa13g017890.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 111 | 8.6e-35 | 35 | 135 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
aCaaCk++rr+Ca+dC+++ yfpa+++++f+n+h+l+G snv ++l+++ +e r d ++s++y A+ + r P +G+ ++i+ lq+q++ l aela
Csa13g017890.1 35 ACAACKHQRRRCAPDCIFRAYFPADRHQDFRNIHRLYGLSNVKHMLARMTPELRGDGIKSIIYGANLWSRFPGQGCSQLIRLLQNQIALLTAELA 129
7********************************************************************************************** PP
DUF260 96 llkeel 101
++++++
Csa13g017890.1 130 RTRTQI 135
999875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MTPNKLVWFL ITTSVIILMT SQGSSGVKQV DKSGACAACK HQRRRCAPDC IFRAYFPADR 60 HQDFRNIHRL YGLSNVKHML ARMTPELRGD GIKSIIYGAN LWSRFPGQGC SQLIRLLQNQ 120 IALLTAELAR TRTQITASAA ASNPAAAAVS NTSDAFFYPP AAKFFYPPTA NFFDPAAFNF 180 FTPTTAVESE LINPFPNIVA NNERTLPPET SATANNNDVQ QSIPNLNINL GTSTVPADDF 240 DFVAGLEASG GAPPNDVQQS IHNPNNLGSS PGPLDDFDFV AGLEASGGAP PNDDPLREFY 300 FGFTDAERSF FGFQDSGDK*
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