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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa12g081610.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
M-type_MADS |
Protein Properties |
Length: 289aa MW: 33060.9 Da PI: 7.4645 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa12g081610.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 68.1 | 8.2e-22 | 7 | 56 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s +++++s+R+++++ KAe LS+LC+++v+vi+++++g l+++++
Csa12g081610.1 7 SSSSYSLASTSLSNRLETVFRKAEQLSILCQIDVCVIYYGPKGDLKTFPN 56
799*********************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MRSLPSSSSS YSLASTSLSN RLETVFRKAE QLSILCQIDV CVIYYGPKGD LKTFPNDKDK 60 VRNMAMRYIQ LNEALRNKKR VNLSEFLKDK GGLENPNKRR KTCPKDKGLD VLIQDKGLDV 120 LIQSLELNIS TFQERVRFLE SSSSSSSSQN HQTQSLNPNP RQFSLFMYNH RDNTLSQIPL 180 SDYDRMSDIT NNSFQHPCYS GVQDSVNNFG MNQLMHKEFY GYDHNMCSMD SINRNSFQHP 240 CEENYSAVQE SVDNSGLMQH EVYGYDQNLC TSNFTYRNVP QPSFSNPV*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |