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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa11g100370.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
Dof |
Protein Properties |
Length: 329aa MW: 37520.3 Da PI: 9.0554 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa11g100370.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 117.3 | 6.2e-37 | 194 | 253 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++ +kcprC+st+tkfCyynnyslsqPryfCk+Crry tkGG+lrn+PvGgg+rknkk s
Csa11g100370.1 194 DHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYGTKGGTLRNIPVGGGCRKNKKPS 253
6789*****************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MLLNRSVFRY FSAKRSVLSR KSLSELESLF CSVVVDSSLH QLYRCISETI KPTKRRRCFL 60 MIGNYHMHED RDSFQKYDQI SCSDYRPLGL SAFKNPVKLS LFPVGGIINI VYNLEDTISI 120 NHNWLNAYNL SWVWDLLWKD YKDTEESIED VRDICDDFEA IFQRNLAANT GSSVIRRKHV 180 RLFDFFSLSL TSHDHPQKCP RCESTHTKFC YYNNYSLSQP RYFCKTCRRY GTKGGTLRNI 240 PVGGGCRKNK KPSSSNSSSS TSSGKKPSNI VTTNTTDLMA LTHSHQNYQN SPLGFSDFGG 300 MMGSYSTPEH SNVGFLESKY GGFTFAEP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB009053 | 1e-175 | AB009053.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2. |
GenBank | AK228992 | 1e-175 | AK228992.1 Arabidopsis thaliana mRNA for Dof zinc finger protein - like, complete cds, clone: RAFL16-29-O12. |
GenBank | BT020467 | 1e-175 | BT020467.1 Arabidopsis thaliana At5g62940 gene, complete cds. |
GenBank | BT020576 | 1e-175 | BT020576.1 Arabidopsis thaliana At5g62940 gene, complete cds. |
GenBank | CP002688 | 1e-175 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |