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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa11g092840.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
NAC |
| Protein Properties |
Length: 290aa MW: 33798.6 Da PI: 5.4864 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g092840.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 60.5 | 5.3e-19 | 12 | 160 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkya....tgkrknra.....tksgyWka 85
G++F+Pt e+++ yLk+ ++g+++e +i d+y ePw L+++ ++ +e ewy+ +++ + ++ gk ++r+ +++g W+a
Csa11g092840.1 12 EGLHFDPTGPEVINSYLKPLLRGEPMED--FIVVKDVYAKEPWLLDHT-NHpflKEGEWYYVTRKTQISKekvgCGKYSKRKiigdgIDRGNWNA 103
599**********************766..788889*********842.22344777***99998776553333566777755666666999*** PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkge..............ktdWvmheyrl 128
gk+ + +++g+++g+k+ +++++++++k + + +W+m+e+rl
Csa11g092840.1 104 NGKEDIIDEETGKVIGIKQNFTYHRASKNKKQkrgdgssvsidvpcNESWIMDEFRL 160
***9999999**************543333332333556666666678899999987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MTTENDYYEE DEGLHFDPTG PEVINSYLKP LLRGEPMEDF IVVKDVYAKE PWLLDHTNHP 60
FLKEGEWYYV TRKTQISKEK VGCGKYSKRK IIGDGIDRGN WNANGKEDII DEETGKVIGI 120
KQNFTYHRAS KNKKQKRGDG SSVSIDVPCN ESWIMDEFRL PTDTFQDTVL CKIHKKKWSE 180
KKKKKEKEND HHEEDKLDQE LVVPPKIHKK RNFKKKKEKD HHEEASTSTN HDQHDDESSS 240
SSSFWEQQKK EALGGEKVNE QVEAMETERY EDWIEELLLG SDQDLLSIP*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 209 | 217 | KRNFKKKKE |
