 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa11g088800.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
WRKY |
| Protein Properties |
Length: 522aa MW: 58112.2 Da PI: 7.4328 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g088800.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98.3 | 4.9e-31 | 193 | 250 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers d+ ++ei+Y+g+H+h+k
Csa11g088800.1 193 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSY-DGLITEIIYKGTHDHPK 250
8****************************************.***************85 PP
|
| 2 | WRKY | 104.3 | 6.6e-33 | 364 | 422 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+ +prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnh+
Csa11g088800.1 364 LDDGYRWRKYGQKVVRGNLNPRSYYKCTATGCPVRKHVERASHDPKAVITTYEGKHNHD 422
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 522 aa
Download sequence Send
to blast |
MDPDDVSNHR KEKESRRDCC GARYKLMSPA KLPISRSSCI TIPPGLSPTS FLESPVLLSN 60
IKAEPSPTTG SLFKPQAVHA SSSPYRGSSS TIHQNIFHEQ HSTDFELRPL PASNMFCAEL 120
DKRTSESPLQ FQSHSLKHSP SSLTEVAASS TEISRPHQTT PSVSDIPERS DPDESAQTSQ 180
NDSKASQPFI LADDGYNWRK YGQKHVKGSE FPRSYYKCTH PNCEVKKLFE RSYDGLITEI 240
IYKGTHDHPK PQPSRRNSGG LVMPAQEERL DKHSSLNGRD EKGSSFYNLP PPLEQNGNPD 300
VSPVSANDDG GDVAMSDKNN DDMDDNDPFS KRRRLDGAME ITPLVKPIRE PRVVVQTLSE 360
VDILDDGYRW RKYGQKVVRG NLNPRSYYKC TATGCPVRKH VERASHDPKA VITTYEGKHN 420
HDVPTARSNN NNHDMSVPRF RPEETTDTIS LNLGVGIASG GPDHPSNEHS HPHQQQQQQH 480
IRPEFIHQTQ TNGTAGFRFV HGPPMGSYYG NSLNAGKNHQ L*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
