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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Csa11g066070.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
WOX |
| Protein Properties |
Length: 318aa MW: 35386.5 Da PI: 6.1215 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g066070.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 51.1 | 2.3e-16 | 55 | 115 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++++eq+++Le+ F++ +p +ee++++ +l ++ +++V++WFqN++ + k+
Csa11g066070.1 55 KPRWNPKPEQIRILESIFNSgIVNPPREEIRRIRIRLqeygQIGDANVFYWFQNQKSRAKH 115
89*****************99*************************************995 PP
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| 2 | Wus_type_Homeobox | 107.8 | 6.7e-35 | 54 | 116 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+++RW+P+peQi+iLe++++sG+++P++eei+ri+ +L+eyG+i+d+NVfyWFQN+k+R ++k
Csa11g066070.1 54 PKPRWNPKPEQIRILESIFNSGIVNPPREEIRRIRIRLQEYGQIGDANVFYWFQNQKSRAKHK 116
579**********************************************************99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MSSSSNKNWP SMFKSKPCNN NHHHQQHESG SPSYMHYSNC NISSSFSSDR VPDPKPRWNP 60
KPEQIRILES IFNSGIVNPP REEIRRIRIR LQEYGQIGDA NVFYWFQNQK SRAKHKLRVH 120
HKSPKTSKKD KIISPGIDAD HCFSLVHQET GLFPVQNNEM LVTQPAGYPS SVQNDLSVAQ 180
SGFGFGDFVV PVVREEGVAF PENDESLDKI PAINFYGGDG NGCGGDCFSP LPLTTNQSQE 240
QAIVFHGGEN VEDCVSPDKL TVFINDMLFE VVAGLFNVKE AFGNDAILIN SFGQPIFTDE 300
NGVTFQSLQN GAVYYLI*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor, which may be involved in embryonic patterning (PubMed:14711878). May be required for basal embryo development after fertilization (PubMed:14711878). Acts partially redundantly with STIP in promoting embryonic cell division and proliferation (PubMed:17706632). Promotes cotyledon boundary formation by maintaining the symmetry in CUC genes expression domains (PubMed:22827849). {ECO:0000269|PubMed:17706632, ECO:0000269|PubMed:22827849, ECO:0000303|PubMed:14711878}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in the zygote after fertilization by the transcription factor WRKY2 (PubMed:21316593). Up-regulated by CLE8 (PubMed:22427333). {ECO:0000269|PubMed:21316593, ECO:0000269|PubMed:22427333}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY251400 | 0.0 | AY251400.1 Arabidopsis thaliana WOX8 protein mRNA, complete cds. |
| Publications
? help Back to Top |
- Xiao W, et al.
DNA methylation is critical for Arabidopsis embryogenesis and seed viability.
Plant Cell, 2006. 18(4): p. 805-14
[PMID:16531498] - Wang W, et al.
Dwarf Tiller1, a Wuschel-related homeobox transcription factor, is required for tiller growth in rice.
PLoS Genet., 2014. 10(3): p. e1004154
[PMID:24625559] - Zhu T,Moschou PN,Alvarez JM,Sohlberg JJ,von Arnold S
Wuschel-related homeobox 8/9 is important for proper embryo patterning in the gymnosperm Norway spruce.
J. Exp. Bot., 2014. 65(22): p. 6543-52
[PMID:25205582] - Ueda M, et al.
Transcriptional integration of paternal and maternal factors in the Arabidopsis zygote.
Genes Dev., 2017. 31(6): p. 617-627
[PMID:28404632]
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