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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa11g057180.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
M-type_MADS |
Protein Properties |
Length: 227aa MW: 25764.2 Da PI: 10.2119 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa11g057180.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 62.9 | 3.5e-20 | 7 | 56 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s v +s+R+++++ KAe LSvLC+++v+vi+++++g l+++++
Csa11g057180.1 7 SSSSSSYPLVALSNRLETVFRKAEQLSVLCQIDVCVIYYGPKGDLKTFPN 56
688899999***************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MRSLPSSSSS SSYPLVALSN RLETVFRKAE QLSVLCQIDV CVIYYGPKGD LKTFPNEKEK 60 VRNMAMRYSR LNDSLRSKKR VSLSEFLKDK GLENPNKRRK TTTSPKKNYV DVLKYPISDH 120 YSPDQIPQLI QSLQLNLSTF QQRLRFLVSQ EKHKQLLDHH HQSFVPSTSS SSLTTPSLNP 180 SQQFSLFVYN HGDNTLSQIP VSASNLNQDF SALLQESQLK NGHNMS*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 77 | 99 | KKRVSLSEFLKDKGLENPNKRRK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |