 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa11g055920.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
bHLH |
| Protein Properties |
Length: 164aa MW: 18575.9 Da PI: 9.9052 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g055920.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 20.7 | 7.3e-07 | 95 | 130 | 20 | 54 |
HHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 20 feeLrellPk.askapskKlsKaeiLekAveYIksL 54
+Lr++lP+ + +s K+s + +L+++++YI+sL
Csa11g055920.1 95 VTKLRQILPEiGQRRRSDKVSASKVLQETCNYIRSL 130
579*******999*********************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 164 aa
Download sequence Send
to blast |
MSNRRSSRQS SSAPRISDDQ MIDLVTKLRQ ILPEIGQRRR SDKCGIEGES KREEAHSLTR 60
VEHSLATLLN MSNRRSSRQS SSAPRISDDQ MIDLVTKLRQ ILPEIGQRRR SDKVSASKVL 120
QETCNYIRSL NREVDNLSER LSQLLESVDE DSPEAAVIRS LLM*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. May have a regulatory role in various aspects of gibberellin-dependent growth and development. {ECO:0000269|PubMed:16527868}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY088246 | 1e-114 | AY088246.1 Arabidopsis thaliana clone 4734 mRNA, complete sequence. |
