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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa11g046590.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
BES1 |
| Protein Properties |
Length: 211aa MW: 24219.6 Da PI: 8.7528 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g046590.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 145 | 6.5e-45 | 2 | 76 | 1 | 75 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskp 75
++++r+ptw+ErEnnkrRERrRRa+a ki++GLR++Gny+lpk++DnneVlkAL +eAGw+ve+D ttyrk +
Csa11g046590.1 2 TSGTRMPTWRERENNKRRERRRRAMADKIFTGLRMYGNYELPKHCDNNEVLKALYNEAGWIVEPDSTTYRKKFAG 76
5899******************************************************************98765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MTSGTRMPTW RERENNKRRE RRRRAMADKI FTGLRMYGNY ELPKHCDNNE VLKALYNEAG 60
WIVEPDSTTY RKKFAGEEGE GVDVQKLFAY IGLFTLVALW WLVWPLTALG MNPSLPYHTL 120
KVDEVVLANG FVGRVLSDYF WYVTMILCCQ LDDSKSQAFS DNFSKNSSST ETLSLEIYHS 180
NNIKRNTNLS QTQKLENLLA LRVNGIDTAK *
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 7e-18 | 6 | 80 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 7e-18 | 6 | 80 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 7e-18 | 6 | 80 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 7e-18 | 6 | 80 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY057538 | 2e-68 | AY057538.1 Arabidopsis thaliana AT4g32140/F10N7_50 mRNA, complete cds. |
| GenBank | AY113057 | 2e-68 | AY113057.1 Arabidopsis thaliana AT4g32140/F10N7_50 mRNA, complete cds. |
