 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa11g044450.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
B3 |
| Protein Properties |
Length: 187aa MW: 21205.3 Da PI: 8.7412 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g044450.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 36.2 | 1.1e-11 | 27 | 94 | 28 | 97 |
--..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
++k + +++l+de+gr +++l+y k+s+++ ++GW+ F+ ng k+g f+ + l++ +++++v+++f
Csa11g044450.1 27 LSKLC-NEIILMDEKGRPSKIQLCYHKSSNSFCASRGWRAFCCMNGHKTGCFLKIVLVH-NGKTPVLRIF 94
55544.59************************************************998.6777999988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MSCCEILYSQ KDEEDNKKKT GKTSIDLSKL CNEIILMDEK GRPSKIQLCY HKSSNSFCAS 60
RGWRAFCCMN GHKTGCFLKI VLVHNGKTPV LRIFPLERDE DGIGKYSEKI KQEVEHESAK 120
DEKNVESLSL SNNSSFVVSV TVSNLREDRL YLSIKLSRSN IPEDKISREK FNTQPGKNMG 180
VMFKIQ*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB046432 | 2e-64 | AB046432.1 Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F22D12. |
| GenBank | CP002688 | 2e-64 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
| GenBank | F18O9 | 2e-64 | AF296831.1 Arabidopsis thaliana BAC F18O9. |
