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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa11g041400.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
ERF |
| Protein Properties |
Length: 345aa MW: 39104.8 Da PI: 9.3407 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g041400.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.5 | 3.8e-19 | 187 | 237 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r++lg+f tae+Aa a++ a+ l+ge
Csa11g041400.1 187 LYRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFETAEQAAMAYDTAAYILRGE 237
59******9.**********955...5************************9997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MNMEDQFPKI ETSFMHDKLL SSGIYGILSS STPPQLLGVP IFLEGMESPL LPPPSTQSYF 60
VSPHHELTSS SHQSPVASVP WNFLESFPQF DQRPDHPSKP PNLTLFLKEP KLLELSQSDS 120
NMIPYHKYIP NSLYQSDQTR NEWVEINKTL TNYPSKGFGN YWLSTTKTQP MKSKTRKVVQ 180
TTTPTKLYRG VRQRHWGKWV AEIRLPRNRT RVWLGTFETA EQAAMAYDTA AYILRGEFAH 240
LNFPDLKHQL KSGSLRCMIA SLLESKIQQI SAAQVSNSPP PPPTKVESLE PKNHMKMEPS 300
GEVVMMKKQK SHKEVMEGDG VQLSRMPSLD MDLIWDALSL PHSS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL035528 | 0.0 | AL035528.2 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project). |
| GenBank | AL161537 | 0.0 | AL161537.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37. |
| GenBank | BT029729 | 0.0 | BT029729.1 Arabidopsis thaliana At4g13620 mRNA, complete cds. |
| GenBank | CP002687 | 0.0 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
