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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa11g037100.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
CPP |
Protein Properties |
Length: 689aa MW: 75474.1 Da PI: 5.7326 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa11g037100.1 | genome | CSGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 50.9 | 3.1e-16 | 385 | 423 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+CnCkkskClk+YCeCfaag++C e C+C dC+Nk
Csa11g037100.1 385 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKP 423
689**********************************96 PP
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2 | TCR | 51.1 | 2.7e-16 | 470 | 509 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkNk
Csa11g037100.1 470 RHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNKF 509
589***********************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 689 aa
Download sequence Send
to blast |
MDTPQKSITQ IGTPNSKSRF EDSPVFNYIN SLSPIRPVKS IQNPHQFSSL NFTSPPSVFT 60 SPHLTSSHKE SRFFKTHNSS SSSSHPTNPT ESREDESTSN ESVSEEAAED TKDVNVDDAS 120 KPEETSVEKV LPQTNPGSPV ASPYGRDSTT ELSLVPYAPT QGGNGSCEGA GMELQPKMFD 180 NVQGKTETPD WESLISDASE LLIFDSPDAS EAFRCFMMQR ASTSEARFNT GVGMQTMQPD 240 ANKKLESSDA IPYEAVSFLH RGIRRRCLDF EMPGNKQTLS ENNTAACESS SRCIVPSIGL 300 HLNAIAMSSK DCKTNVTQDY SCSGNIQVGL QSSISSTLQE TLDQTENETR EDADQDVPVE 360 PALQELNLSS PKKKRVKLDS GEGDSCKRCN CKKSKCLKLY CECFAAGVYC IEPCSCIDCF 420 NKPIHEDTVL ATRKQIESRN PLAFAPKVIR NSDSVLETGD DASKTPASAR HKRGCNCKKS 480 NCLKKYCECY QGGVGCSINC RCEGCKNKFG RKDGSSIVDM EAEQEEENET SEKYRTAKSQ 540 QNTEFLMRKE ASSALPTTPT PIYRQELVEL LPFSSSKNRM PPPQSLLGGG SSSGIFNSQY 600 IRKPDIDLTQ SRMEKSFETV AEDRAEEMPE ILIHSPIPNI KSVSPNGKRV SPPHMESSSS 660 GSISGRRSGG RKLILQSIPS FPSLTPQH*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 370 | 377 | PKKKRVKL |
2 | 370 | 378 | PKKKRVKLD |
Functional Description ? help
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Source |
Description |
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL161539 | 1e-136 | AL161539.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39. |
GenBank | CP002687 | 1e-136 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
GenBank | Z97337 | 1e-136 | Z97337.2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2. |