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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa11g030950.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
G2-like |
| Protein Properties |
Length: 329aa MW: 37970.6 Da PI: 10.4318 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g030950.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 89 | 4.3e-28 | 147 | 197 | 2 | 52 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52
pr+rWt +LH++Fv+av+ LGG+e+AtPk++lelm+v++Ltl+hvkSHLQ
Csa11g030950.1 147 PRMRWTATLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQN 197
9*************************************************5 PP
|
| 2 | G2-like | 89.6 | 2.8e-28 | 261 | 310 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
pr+rWt +LH++Fv+av+ LGG+e+AtPk++lelm+v++Ltl+hvkSHLQ
Csa11g030950.1 261 PRMRWTATLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQ 310
9************************************************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
LIEYTXKENQ EQEVERRLLG FRSKASDSDR DSSGNLIHAL QFTSSKSEPI KTGNNQEHNE 60
SLDQDLRSML MMRPIRGIPL YKNQVLDHYY YSSTSPSPFF FSEVNGQHAS RRIITNPNCS 120
YNLHHRNRRQ AQPQPPRFTA KRGVRAPRMR WTATLHAHFV HAVQLLGGHE RATPKSVLEL 180
MDVQDLTLAH VKSHLQNQVL DHYYYSSTSP SPFFFSEVNG QHASRRIITN PNCSYNLHHR 240
NRRQAQPQPP RFTAKRGVRA PRMRWTATLH AHFVHAVQLL GGHERATPKS VLELMDVQDL 300
TLAHVKSHLQ LIEYTFGRHH ISKDIYIP*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 3e-13 | 148 | 310 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-13 | 148 | 310 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-13 | 148 | 310 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-13 | 148 | 310 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-13 | 148 | 310 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that regulates lateral organ polarity. Plays a role in lateral root formation and development. {ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:17307928}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY048690 | 0.0 | AY048690.1 Arabidopsis thaliana GARP-like putative transcription factor KANADI3 (KAN3) mRNA, complete cds. |
