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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa11g030400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
WRKY |
Protein Properties |
Length: 324aa MW: 35883.1 Da PI: 6.7927 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa11g030400.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 108 | 4.6e-34 | 174 | 231 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp+vv++tYeg+Hnh+
Csa11g030400.1 174 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCNVKKRVERSFQDPTVVITTYEGQHNHP 231
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MSNETRDLYN YQYPPSFSLH EMMNLPTSNP SSYGNTIASQ NGFDPSSYSF TDCLQSTLGA 60 YESLLHKTFG QSPSSSEVFN SSIDQESNRD VTNNDVINGG ACTETTTRVS ASSSSSEADH 120 PGEDSGKSGR KRELVGDEED QSSKKVGKTK KNEVKKQREP RVSFMTKSEV DHLEDGYRWR 180 KYGQKAVKNS PYPRSYYRCT TQRCNVKKRV ERSFQDPTVV ITTYEGQHNH PIPTNLRGNS 240 AAAAMFSADG LMTPRSFAHD MFRTAAYTNG GAAAAALDYG YGQSGYGSVN ANPSSHQEYN 300 HNGGDQYELL REIFPSVFFK QEP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF442393 | 0.0 | AF442393.1 Arabidopsis thaliana WRKY transcription factor 28 (WRKY28) mRNA, complete cds. |
GenBank | AY070761 | 0.0 | AY070761.1 Arabidopsis thaliana AT4g18170/T9A21_10 mRNA, complete cds. |
GenBank | AY116943 | 0.0 | AY116943.1 Arabidopsis thaliana AT4g18170/T9A21_10 mRNA, complete cds. |