 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa11g024150.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
WRKY |
| Protein Properties |
Length: 541aa MW: 59142.6 Da PI: 5.8413 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g024150.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.2 | 1.1e-30 | 298 | 356 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt+a Cpv+k+v+r+aed +++++tYeg+Hnh+
Csa11g024150.1 298 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAgACPVRKQVQRCAEDRSILITTYEGNHNHP 356
7****************************99***************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 541 aa
Download sequence Send
to blast |
MFRFPVSLGG SRDEARHDQI TPLDEHRVVV DEVDFFSEKR DRVSREDIND DEDEEANKVH 60
VKMENSRVEE NDRSRDVNIG LKLLTANTGS DESTVDDGLS MDMEDKRAKI ENAQLQEELK 120
KMKIENQRLR DMLSQATNNF NSLQMQLVAV MRQQEQRNSS QEHLLATEGK AEGRKRQELH 180
TMVPRQFMDL GPSSGATEHE AEVLSEERTM IHSGSPPSLL ESSNLRENGK RLLGREESPE 240
ESESNAWGNP NKVPKHNSSS SNNNNNGNGN VIDQSAAEAT MRKARVSVRA RSEAPMISDG 300
CQWRKYGQKM AKGNPCPRAY YRCTMAGACP VRKQVQRCAE DRSILITTYE GNHNHPLPPA 360
AMAMASTTTA AASMLLSGSM SSQDGLMNPT NLLARAILPC SSSMATISAS APFPTITLDL 420
TNSPNGNNPN MTTNNPLMQF VQRPGFNPAV LPQVVGQALY YNQQQSKFSG LQLPAQPLQI 480
PATSSVSESV SAASAAIASD PNFAAALAAA ITSIMNGSSH QNNNTNNNNN VATSNGDNRQ 540
*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY052648 | 0.0 | AY052648.1 Arabidopsis thaliana WRKY transcription factor 31 (WRKY31) mRNA, complete cds. |
