 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa11g020520.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
WRKY |
| Protein Properties |
Length: 360aa MW: 39139.1 Da PI: 10.2947 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g020520.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.4 | 4e-30 | 286 | 344 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d ++++tYeg Hnh
Csa11g020520.1 286 SDEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDAMMLIVTYEGVHNHA 344
69*************************988****************************6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MAVELMMSSS SSYGAGGKGD SFPSISAKLE EDTALREAAS AGIHGVEEFL KLIGQSHQTE 60
EITAVTDVAV NSFKKMISLL GRSRTGHARF RRAPTTTTAT TQTPFIKQTT VVEEEAQEEK 120
KPEITAVFAK QKTEQYHGGG SAFRVYCPTP IHRRPPLSHS NQSQTKNGSS SSSPPILANG 180
GPPPQPPSTI NFAPSQPVSA TNSFMPSHSH RCETESTHMS SGFEFTNPSH LSGSRGKPPL 240
SASASLKRRC NSSPSSRCHC SKKRKSRVKR VIRVPAVSRK MADIPSDEFS WRKYGQKPIK 300
GSPHPRGYYK CSSVRGCPAR KHVERALDDA MMLIVTYEGV HNHALVLETT TTTHHDKTL*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 246 | 264 | KRRCNSSPSSRCHCSKKRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF272746 | 0.0 | AF272746.1 Arabidopsis thaliana WRKY DNA-binding protein 7 (WRKY7) mRNA, complete cds. |
| GenBank | AY072151 | 0.0 | AY072151.1 Arabidopsis thaliana putative DNA-binding protein (At4g24240) mRNA, complete cds. |
| GenBank | AY084583 | 0.0 | AY084583.1 Arabidopsis thaliana clone 112528 mRNA, complete sequence. |
| GenBank | AY096490 | 0.0 | AY096490.1 Arabidopsis thaliana putative DNA-binding protein (At4g24240) mRNA, complete cds. |
