 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa11g012280.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
ERF |
| Protein Properties |
Length: 188aa MW: 21087.9 Da PI: 6.9449 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g012280.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.3 | 9.4e-19 | 26 | 76 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+ykGVr + +g+Wv+eIr+p+ + kr++lg+++ +e+Aa+a++aa +++ge
Csa11g012280.1 26 CYKGVRKRA-WGKWVSEIRVPK----TgKRIWLGSYDAPEKAARAYDAALFCIKGE 76
8*****887.**********95....35************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MPSSPPKAPF LRSSPKEAHE DQRFKCYKGV RKRAWGKWVS EIRVPKTGKR IWLGSYDAPE 60
KAARAYDAAL FCIKGEKGVF NFPTDKKPQL PEGYVRPLSK HDIQTISTNY AYSAVHVPSH 120
VTTLTVTSQV PSEVYVSPNV SASTEITEVV DEYYLPTDAT AESIFSVEDL QLDNFLMMDI 180
DWINNLV*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB493712 | 0.0 | AB493712.1 Arabidopsis thaliana At4g31060 mRNA for hypothetical protein, partial cds, clone: RAAt4g31060. |
| GenBank | AL022198 | 0.0 | AL022198.1 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project). |
| GenBank | AL161578 | 0.0 | AL161578.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74. |
| GenBank | AY560884 | 0.0 | AY560884.1 Arabidopsis thaliana putative AP2/EREBP transcription factor (At4g31060) mRNA, complete cds. |
| GenBank | BT011774 | 0.0 | BT011774.1 Arabidopsis thaliana At4g31060 mRNA, complete cds. |
| GenBank | BT012399 | 0.0 | BT012399.1 Arabidopsis thaliana At4g31060 mRNA, complete cds. |
| GenBank | CP002687 | 0.0 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
