 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Csa11g012120.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
Trihelix |
| Protein Properties |
Length: 296aa MW: 33697.7 Da PI: 4.7439 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g012120.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 37.4 | 6.8e-12 | 19 | 97 | 2 | 80 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80
Wt + l L++ +e++ +++ + ++W +s+++ + ++r+ +qC+ kw++l +y +ik++e++ + ++s ++
Csa11g012120.1 19 WTVKDCLILVNEIAAVESDCSNALSSFQKWTMISENCNALDVRRTLNQCRRKWDSLLSDYNQIKQWESRSQGSARSYWS 97
99999999************************************************************98666666665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MDEGTSGSRR LRSQVAPDWT VKDCLILVNE IAAVESDCSN ALSSFQKWTM ISENCNALDV 60
RRTLNQCRRK WDSLLSDYNQ IKQWESRSQG SARSYWSLSV EKRKLLNLPG NVDKEIFEAV 120
SAVVMIQDDK AGTESDSDPE EDDVVDITAE FAYVGSKRSR QRATVTKEIP PQKTKIQEPR 180
RYRVEEYSQQ KPTKAAHPHQ NKTMEEEKKP AEEISTDEEE EEPMNIEEDV EVTQAKLSYK 240
IDLIHAIVGR NLAKDNETGD DISIKDKLKY VRQQGDELIA CLSEIVKTLG RLREV*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G31270.1 | 1e-138 | sequence-specific DNA binding transcription factors |
