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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Csa11g011760.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
B3 |
| Protein Properties |
Length: 411aa MW: 46782.5 Da PI: 8.402 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g011760.1 | genome | CSGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 50.6 | 3.5e-16 | 24 | 101 | 14 | 97 |
T-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 14 grlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
+ l++p kf++ + g + e+kt+ l++ s sW+v++ ++++ lt GWkeF+ a++L++gD++vF++dg s f +v+ f
Csa11g011760.1 24 SYLTIPVKFFSVYlleGRN--EGKTVELRSdASEISWKVEM--EGRR----LTVGWKEFATAHDLRVGDVIVFRHDGASVF--HVTCF 101
459*******999*95444..6679999986888*******..8888....************************999999..88776 PP
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| 2 | B3 | 60.9 | 2.2e-19 | 193 | 288 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS....-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg....rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
f +l++ ++l+++ lpk+f g+ +e+s++++l+de ++W++ l++r++sg++++++GW++F+ +n+Lk D+v+Fkl++++++++
Csa11g011760.1 193 FVALVSDSNLRNDTRFLPKRFS---GSLTEGSIQIVLMDEGMvegvKTWTLVLKFRNSSGTFYMRDGWRSFCYENELKPDDTVTFKLESKTKETP 284
567889999************9...55567899******999*********************************************98877777 PP
EEEE CS
B3 93 vvkv 96
+++
Csa11g011760.1 285 ILRF 288
7665 PP
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| 3 | B3 | 55.5 | 1e-17 | 306 | 399 | 6 | 98 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98
+++ +s++ lp +f++ +g+++ e k++tl d++g++W v+l ++k+ ++ l+ G keF kang+k+++++vF+l+++ +++ + +++++
Csa11g011760.1 306 RNKSGDSSSQKHLPVNFIKVNGMENLERKKMTLLDKHGKEWPVNLVMEKGNTQTRLGLGLKEFFKANGIKANESLVFELVWEdKTTLPILQLCS 399
56777888899**********9999999****************************************************99777777777776 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 411 aa
Download sequence Send
to blast |
MANPVLESPT NPHFFQPLLP GFDSYLTIPV KFFSVYLLEG RNEGKTVELR SDASEISWKV 60
EMEGRRLTVG WKEFATAHDL RVGDVIVFRH DGASVFHVTC FGPSCCEIQY VQSCDHDDNL 120
DDDQENIRNL SMKQSLKTEP ESLLDEDKDY MERLQGLTCR NFMKTGKLPR KKHVKKRIPE 180
AKAKSFSSDP SCFVALVSDS NLRNDTRFLP KRFSGSLTEG SIQIVLMDEG MVEGVKTWTL 240
VLKFRNSSGT FYMRDGWRSF CYENELKPDD TVTFKLESKT KETPILRFST AELKSVSTKD 300
CNKRKRNKSG DSSSQKHLPV NFIKVNGMEN LERKKMTLLD KHGKEWPVNL VMEKGNTQTR 360
LGLGLKEFFK ANGIKANESL VFELVWEDKT TLPILQLCSN TKTCPVIVNS *
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